<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd"> <html > <head><title>1.1.3.0 cartography_from_layers.py</title> <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1"> <meta name="generator" content="TeX4ht (http://www.cse.ohio-state.edu/~gurari/TeX4ht/)"> <meta name="originator" content="TeX4ht (http://www.cse.ohio-state.edu/~gurari/TeX4ht/)"> <!-- html,index=2,3,4,5,next --> <meta name="src" content="mammult_doc.tex"> <meta name="date" content="2015-10-19 17:14:00"> <link rel="stylesheet" type="text/css" href="mammult_doc.css"> </head><body > <!--l. 4--><div class="crosslinks"><p class="noindent">[<a href="mammult_docsu17.html" >next</a>] [<a href="mammult_docsu15.html" >prev</a>] [<a href="mammult_docsu15.html#tailmammult_docsu15.html" >prev-tail</a>] [<a href="#tailmammult_docsu16.html">tail</a>] [<a href="mammult_docsu14.html#mammult_docsu16.html" >up</a>] </p></div> <h5 class="subsubsectionHead"><a id="x20-190001.1.3"></a><span class="cmtt-10x-x-109">cartography</span><span class="cmtt-10x-x-109">_from</span><span class="cmtt-10x-x-109">_layers.py</span></h5> <!--l. 4--><p class="noindent" ><span class="cmbx-10x-x-109">NAME</span> <!--l. 4--><p class="indent" > <span class="cmbx-10x-x-109">cartography</span><span class="cmbx-10x-x-109">_from</span><span class="cmbx-10x-x-109">_layers.py </span>- compute the total degree and the multiplex participation coefficient of all the nodes of a multiplex. <!--l. 4--><p class="noindent" ><span class="cmbx-10x-x-109">SYNOPSYS</span> <!--l. 4--><p class="indent" > <span class="cmbx-10x-x-109">cartography</span><span class="cmbx-10x-x-109">_from</span><span class="cmbx-10x-x-109">_layers.py </span><span class="cmmi-10x-x-109"><</span><span class="cmitt-10x-x-109">layer1</span><span class="cmmi-10x-x-109">> <</span><span class="cmitt-10x-x-109">layer2</span><span class="cmmi-10x-x-109">> </span><span class="cmitt-10x-x-109">[</span><span class="cmmi-10x-x-109"><</span><span class="cmitt-10x-x-109">layer3</span><span class="cmmi-10x-x-109">></span><span class="cmitt-10x-x-109">...]</span> <!--l. 24--><p class="noindent" ><span class="cmbx-10x-x-109">DESCRIPTION</span> <!--l. 24--><p class="indent" > Compute and print on output the total degree and the multiplex participation coefficient <span class="cmmi-10x-x-109">P</span><sub><span class="cmmi-8">i</span></sub> for each node <span class="cmmi-10x-x-109">i </span>of a multiplex. The participation coefficient is defined as: <table class="equation-star"><tr><td> <center class="math-display" > <img src="mammult_doc2x.png" alt=" [ M [α] ] -M---- ∑ ki--2 Pi = M − 1 1 − ( oi ) α=1 " class="math-display" ></center></td></tr></table> <!--l. 24--><p class="nopar" > <!--l. 24--><p class="noindent" >Note that <span class="cmmi-10x-x-109">P</span><sub><span class="cmmi-8">i</span></sub> takes values in [0<span class="cmmi-10x-x-109">,</span>1], where <span class="cmmi-10x-x-109">P</span><sub><span class="cmmi-8">i</span></sub> = 0 if and only if node <span class="cmmi-10x-x-109">i </span>is active on exactly one of the layers, while <span class="cmmi-10x-x-109">P</span><sub><span class="cmmi-8">i</span></sub> = 1 if node <span class="cmmi-10x-x-109">i </span>has equal degree on all the <span class="cmmi-10x-x-109">M</span> layers. <!--l. 24--><p class="indent" > Each input file contains the (undirected) edge list of a layer, and each line is in the format: <!--l. 24--><p class="indent" >   <span class="cmti-10x-x-109">src</span><span class="cmti-10x-x-109">_ID dest</span><span class="cmti-10x-x-109">_ID</span> <!--l. 24--><p class="indent" > where <span class="cmti-10x-x-109">src</span><span class="cmti-10x-x-109">_ID </span>and <span class="cmti-10x-x-109">dest</span><span class="cmti-10x-x-109">_ID </span>are the IDs of the two endpoints of an edge. <!--l. 43--><p class="noindent" ><span class="cmbx-10x-x-109">OUTPUT</span> <!--l. 43--><p class="indent" > The program prints on <span class="cmtt-10x-x-109">stdout </span>a list of lines in the format: <!--l. 43--><p class="indent" >   <span class="cmti-10x-x-109">deg</span><span class="cmti-10x-x-109">_n P</span><span class="cmti-10x-x-109">_n col</span><span class="cmti-10x-x-109">_n</span> <!--l. 43--><p class="indent" > where <span class="cmti-10x-x-109">deg</span><span class="cmti-10x-x-109">_n </span>is the total degree of node <span class="cmmi-10x-x-109">n</span>, <span class="cmti-10x-x-109">P</span><span class="cmti-10x-x-109">_n </span>is the participation coefficient of node <span class="cmmi-10x-x-109">n </span>and <span class="cmti-10x-x-109">col </span>is the integer representation of the activity bitstring of node <span class="cmmi-10x-x-109">n</span>, which is a number between 0 and 2<sup><span class="cmmi-8">M</span></sup> <span class="cmsy-10x-x-109">− </span>1. The field <span class="cmti-10x-x-109">col </span>might be useful for the visualisation of the multiplex cartography diagram, where it would be possible to associate different colors to nodes having different node activity patterns. <!--l. 43--><p class="noindent" >As usual, node IDs start from zero and proceed sequentially, without gaps, i.e., if a node ID is not present in any of the layer files given as input, the program considers it as being isolated on all the layers, and is set to zero. <!--l. 45--><p class="noindent" ><span class="cmbx-10x-x-109">REFERENCE</span> <!--l. 45--><p class="indent" > F. Battiston, V. Nicosia, V. Latora, “Structural measures for multiplex networks”, <span class="cmti-10x-x-109">Phys. Rev. E </span><span class="cmbx-10x-x-109">89</span>, 032804 (2014). <!--l. 45--><p class="indent" > Link to paper: <a href="http://journals.aps.org/pre/abstract/10.1103/PhysRevE.89.032804" class="url" ><span class="cmtt-10x-x-109">http://journals.aps.org/pre/abstract/10.1103/PhysRevE.89.032804</span></a> <!--l. 3--><div class="crosslinks"><p class="noindent">[<a href="mammult_docsu17.html" >next</a>] [<a href="mammult_docsu15.html" >prev</a>] [<a href="mammult_docsu15.html#tailmammult_docsu15.html" >prev-tail</a>] [<a href="mammult_docsu16.html" >front</a>] [<a href="mammult_docsu14.html#mammult_docsu16.html" >up</a>] </p></div> <!--l. 3--><p class="indent" > <a id="tailmammult_docsu16.html"></a> </body></html>